TY - JOUR A1 - Aboualizadeh, E A1 - Ranji, M A1 - Sorenson, C M A1 - Sepehr, R A1 - Sheibani, N A1 - Hirschmugl, C J T1 - Retinal oxidative stress at the onset of diabetes determined by synchrotron FTIR widefield imaging: towards diabetes pathogenesis. Y1 - 2017/03/27 N1 - R835737 JF - ANALYST J1 - ANALYST VL - 142 IS - 7 SP - 1061 EP - 1072 ER - TY - JOUR A1 - Aboualizadeh, E A1 - Sorenson, C M A1 - Schofield, A J A1 - Unger, M A1 - Sheibani, N A1 - Hirschmugl, C J T1 - Temporal diabetes-induced biochemical changes in distinctive layers of mouse retina. Y1 - 2018/01/18 N1 - R835737 VL - 8 IS - 1 SP - 1096 (13 pp.) ER - TY - JOUR A1 - Aisenbrey, E A1 - Murphy, W T1 - Synthetic alternatives to Matrigel Y1 - 2020//01 N1 - R835737 JF - NATURE REVIEWS MATERIALS J1 - Nature Reviews Materials ER - TY - JOUR A1 - Bakooshli, M A1 - Lippmann, E A1 - Mulcahy, B A1 - Iyer, N A1 - Nguyen, C A1 - Tung, K A1 - Stewart, B A1 - van, D A1 - Fuehrmann, T A1 - Gilbert, P A1 - Shoichet, M A1 - Bigot, A A1 - Pegoraro, E A1 - Ahn, H A1 - Ginsberg, H A1 - Zhen, M A1 - Ashton, R T1 - A 3D culture model of innervated human skeletal muscle enables studies of the adult neuromuscular junction Y1 - 2019/05/14 N1 - R835737 JF - DEVELOPMENTAL BIOLOGHY, STEM CELLS AND REGENERATIVE MEDICINE VL - 8 IS - e44530 ER - TY - JOUR A1 - Barry, C A1 - Schmitz, M T A1 - Propson, N E A1 - Hou, Z A1 - Zhang, J A1 - Nguyen, B K A1 - Bolin, J M A1 - Jiang, P A1 - McIntosh, B E A1 - Probasco, M D A1 - Swanson, S A1 - Stewart, R A1 - Thomson, J A A1 - Schwartz, M P A1 - Murphy, W L T1 - Uniform neural tissue models produced on synthetic hydrogels using standard culture techniques. Y1 - 2017/11/ N1 - R835737 N1 - R835737C001 JF - EXPERIMENT BIOLOGY MEDICINE VL - 242 IS - 17 SP - 1679 EP - 1689 ER - TY - JOUR A1 - Belair, D G A1 - Schwartz, M P A1 - Knudsen, T A1 - Murphy, W L T1 - Human iPSC-derived endothelial cell sprouting assay in synthetic hydogel arrays. Y1 - 2016/07/15 N1 - R835737 N1 - R835737C004 JF - ACTA BIOMATERIALIA VL - 39 SP - 12 EP - 24 ER - TY - JOUR A1 - Belair, D G A1 - Miller, M J A1 - Wang, S A1 - Darjatmoko, S R A1 - Binder, B A1 - Sheibani, N A1 - Murphy, W L T1 - Differential regulation of angiogenesis using degradable VEGF-binding microspheres. Y1 - 2016/07/ N1 - R835737 N1 - R835737C004 JF - BIOMATERIALS J1 - BIOMATERIALS VL - 93 SP - 27 EP - 37 ER - TY - JOUR A1 - Belair, D G A1 - Le, N N A1 - Murphy, W L T1 - Regulating VEGF signaling in platelet concentrates via specific VEGF sequestering. Y1 - 2016/05/26 N1 - R835737 N1 - R835737C004 JF - BIOMATERIALS SCIENCE VL - 4 IS - 5 SP - 819 EP - 825 ER - TY - JOUR A1 - Chasman, D A1 - Walters, K B A1 - Lopes, T J A1 - Eisfeld, A J A1 - Kawaoka, Y A1 - Roy, S T1 - Integrating transcriptomic and proteomic data using predictive regulatory network models of host response to pathogens. Y1 - 2016/07/12 N1 - R835737C005 N1 - R835737 JF - PLOS COMPUTATIONAL BIOLOGY VL - 12 IS - 7 SP - e1005013 (42 pp.) ER - TY - JOUR A1 - Chasman, D A1 - Fotuhi, S A1 - Roy, S T1 - Network-based approaches for analysis of complex biological systems. Y1 - 2016/06/ N1 - R835737C005 N1 - R835737 JF - CURRENT OPINION IN BIOTECHNOLOGY J1 - CURR OPIN BIOTECH VL - 39 SP - 157 EP - 166 ER - TY - JOUR A1 - Chasman, D A1 - Roy, S T1 - Inference of cell type specific regulatory networks on mammalian lineages. Y1 - 2017/04/ N1 - R835737C005 N1 - R835737 N1 - R835737C004 JF - CURRENT OPINION IN SYSTEMS BIOLOGY VL - 2 SP - 130 EP - 139 ER - TY - JOUR A1 - Clements, A E A1 - Groves, E R A1 - Chamberlain, C S A1 - Vanderby, R A1 - Murphy, W L T1 - Microparticles locally deliver active interleukin-1 receptor antagonist in vivo. Y1 - 2018/07/04 N1 - R835737 VL - 7 IS - 16 SP - 1800263. ER - TY - JOUR A1 - Dinu, D A1 - Chu, C A1 - Veith, A A1 - Lingappan, K A1 - Couroucli, X A1 - Jefcoate, C R A1 - Sheibani, N A1 - Moorthy, B T1 - Mechanistic role of cytochrome P450 (CYP)1B1 in oxygen-mediated toxicity in pulmonary cells: a novel target for prevention of hyperoxic lung injury. Y1 - 2016/08/5 N1 - R835737 N1 - R835737C004 JF - BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS J1 - BIOCHEM BIOPH RES CO VL - 476 IS - 4 SP - 346 EP - 351 ER - TY - JOUR A1 - Estevez-Silva, M A1 - Sreeram, A A1 - Cuskey, S A1 - Fedorchak, N A1 - Layer, N A1 - Ashton, R T1 - Single-injection ex ovo transplantation method for broad spinal cord engraftment of human pluripotent stem cell-derived motor neurons Y1 - 2018/03/01 N1 - R835737 JF - JOURNAL OF NEUROSCIENCE METHODS J1 - J NEUROSCI METH VL - 298 SP - 16 EP - 23 ER - TY - JOUR A1 - Falero-Perez, J A1 - Park, S A1 - Sorenson, C M A1 - Sheibani, N T1 - PEDF expression affects retinal endothelial cell proangiogenic properties through alterations in cell adhesive mechanisms. Y1 - 2017/10/ N1 - R835737 VL - 313 IS - 4 SP - C405 EP - C420 ER - TY - JOUR A1 - Falero-Perez, J A1 - Sorenson, C A1 - Sheibani, N T1 - Cyp1b1-deficient retinal astrocytes are more proliferative and migratory and are protected from oxidative stress and inflammation. Y1 - 2019/05/21 N1 - R835737 JF - AMERICAN JOURNAL OF PHYSIOLOGY J1 - AM J PHYSIOL VL - 306 IS - 6 SP - C767 EP - C781 ER - TY - JOUR A1 - Farnoodian, M A1 - Halbach, C A1 - Slinger, C A1 - Pattnaik, B R A1 - Sorenson, C M A1 - Sheibani, N T1 - High glucose promotes the migration of retinal pigment epithelial cells through increased oxidative stress and PEDF expression. Y1 - 2016/09/01 N1 - R835737 N1 - R835737C004 JF - AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY J1 - AM J PHYSIOL-CELL PH VL - 311 IS - 3 SP - C418 EP - C436 ER - TY - JOUR A1 - Farnoodian, M A1 - Wang, S A1 - Dietz, J A1 - Nickells, R W A1 - Sorenson, C M A1 - Sheibani, N T1 - Negative regulators of angiogenesis: important targets for treatment of exudative AMD. Y1 - 2017/07/5 N1 - R835737 VL - 131 IS - 15 SP - 1763 EP - 1780 ER - TY - JOUR A1 - Farnoodian, M A1 - Sorenson, C M A1 - Sheibani, N T1 - PEDF expression affects the oxidative and inflammatory state of choroidal endothelial cells. Y1 - 2018/04/1 N1 - R835737 VL - 314 IS - 4 SP - C456 EP - C472 ER - TY - JOUR A1 - Fontana, G A1 - Gershlak, J A1 - Adamski, M A1 - Lee, J A1 - Matsumoto, S A1 - Le, H D A1 - Binder, B A1 - Wirth, J A1 - Gaudette, G A1 - Murphy, W L T1 - Biofunctionalized plants as diverse biomaterials for human cell culture. Y1 - 2017/04/ N1 - R835737 JF - ADVANCED HEALTHCARE MATERIALS VL - 6 IS - 8 SP - 1601225 (16 pp.) ER - TY - JOUR A1 - Garcia, K A1 - Chasman, D A1 - Roy, S A1 - Ane, J T1 - Physiological responses and gene co-expression network of mycorrhizal roots under K+ deprivation. Y1 - 2017/03/ N1 - R835737C005 N1 - R835737 N1 - R835737C004 JF - PLANT PHYSIOLOGY J1 - PLANT PHYSIOL VL - 173 IS - 3 SP - 1811 EP - 1823 ER - TY - JOUR A1 - Ghanian, Z A1 - Staniszewski, K A1 - Jamali, N A1 - Sepehr, R A1 - Wang, S A1 - Sorenson, C M A1 - Sheibani, N A1 - Ranji, M T1 - Quantitative assessment of retinopathy using multi-parameter image analysis. Y1 - 2016/04/ N1 - R835737 N1 - R835737C004 JF - JOURNAL OF MEDICAL SIGNALS AND SENSORS VL - 6 IS - 2 SP - 71 EP - 80 ER - TY - JOUR A1 - Gurel, Z A1 - Sheibani, N T1 - O-Linked β-N -acetylglucosamine (O-GlcNAc) modification:a new pathway to decode pathogenesis of diabetic retinopathy. Y1 - 2018/01/19 N1 - R835737 VL - 132 IS - 2 SP - 185 EP - 198 ER - TY - JOUR A1 - Ibrahim, A S A1 - Saleh, H A1 - El-Shafey, M A1 - Hussein, K A A1 - El-Masry, K A1 - Baban, B A1 - Sheibani, N A1 - Wang, M H A1 - Tawfik, A A1 - Al-Shabrawey, M T1 - Targeting of 12/15-Lipoxygenase in retinal endothelial cells, but not in monocytes/macrophages, attenuates high glucose-induced retinal leukostasis. Y1 - 2017/06/ N1 - R835737 JF - BIOCHIMICA ET BIOPHYSICA ACTA (BBA)-MOLECULAR BASIS OF DISEASE VL - 1862 IS - 6 SP - 636 EP - 645 ER - TY - JOUR A1 - Iyer, N A1 - Shin, J A1 - Cuskey, S A1 - Tian, Y A1 - Nicol, N A1 - Doersch, T A1 - Seipel, F A1 - McCalla, S A1 - Roy, S A1 - Ashton, R T1 - Modular derivation of diverse, regionally discrete human posterior CNS neurons enables discovery of transcriptomic patterns Y1 - 2022/12/01 N1 - R835737 JF - SCIENCE ADVANCES J1 - SCIENCE ADVANCES VL - 8 IS - 39 SP - eabn7430 ER - TY - JOUR A1 - Jamali, N A1 - Wang, S A1 - Darjatmoko, S R A1 - Sorenson, C M A1 - Sheibani, N T1 - Vitamin D receptor expression is essential during retinal vascular development and attenuation of neovascularization by 1, 25(OH)2 D3 . Y1 - 2017/12/22 N1 - R835737 JF - PLOS ONE J1 - PLOS One VL - 12 IS - 12 SP - e0190131 (20 pp.) ER - TY - JOUR A1 - Jamali, N A1 - Sorenson, C M A1 - Sheibani, N T1 - Vitamin D and regulation of vascular cell function. Y1 - 2018/04/1 N1 - R835737 VL - 314 IS - 4 SP - H753 EP - H765 ER - TY - JOUR A1 - Johnson, B A1 - VItek, R A1 - Morgan, M A1 - Fink, D A1 - Beames, T A1 - Geiger, P A1 - Beebe, D A1 - Lipinski, R T1 - A Microphysiological Approach to Evaluate Effectors of Intercellular Hedgehog Signaling in Development Y1 - 2021//01 N1 - R835737 JF - FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY VL - 9 SP - 71 ER - TY - JOUR A1 - Kauschik, G A1 - Gupta, K A1 - Harms, V A1 - Torr, E A1 - Evans, J A1 - Johnson, H A1 - Soref, C A1 - Acevedo-Acevedo, S A1 - Antosiewicz-Bourget, J A1 - Mamott, D T1 - Engineered Perineural Vascular Plexus for Modeling Developmental Toxicity Y1 - 2020//01 N1 - R835737 JF - ADVANCED HEALCARE MATERIALS J1 - Advanced Healcare Materials IS - 2000825 ER - TY - JOUR A1 - Khalil, A S A1 - Yu, X A1 - Xie, A W A1 - Fontana, G A1 - Umhoefer, J M A1 - Johnson, H J A1 - Hookway, T A A1 - McDevitt, T C A1 - Murphy, W L T1 - Functionalization of microparticles with mineral coatings enhances non-viral transfection of primary human cells. Y1 - 2017/10/27 N1 - R835737 JF - SCIENTIFIC REPORTS J1 - Scientific Reports VL - 7 IS - 1 SP - 14211 (12 pp.) ER - TY - JOUR A1 - Khalil, A A1 - Yu, X A1 - Umhoefer, J A1 - Chamberlain, C A1 - COnnie, S A1 - Wildenauer, L A1 - Diarra, G A1 - Hacker, T A1 - Murphy, W T1 - Single-dose mRNA therapy via biomaterial-mediated sequestration of overexpressed proteins Y1 - 2020//01 N1 - R835737 JF - SCIENCE ADVANCES J1 - SCIENCE ADVANCES VL - 6 IS - 27 SP - eaba2422 ER - TY - JOUR A1 - Knight, G T A1 - Sha, J A1 - Ashton, R S T1 - Micropatterned, clickable culture substrates enable in situ spatiotemporal control of human PSC-derived neural tissue morphology. Y1 - 2015/03/28 N1 - R835737 N1 - R835737C002 JF - CHEMICAL COMMUNICATIONS J1 - CHEM COMMUN VL - 51 IS - 25 SP - 5238 EP - 5241 ER - TY - JOUR A1 - Knight, G T A1 - Lundin, B F A1 - Iyer, N A1 - Ashton, L A1 - Sethares, W A A1 - Willett, R M A1 - Ashton, R S T1 - Engineering induction of singular neural rosette emergence within jPSC-derived tissues. Y1 - 2018/10/29 N1 - R835737 N1 - R835737C002 VL - 7 IS - e37549 SP - e37549 (23 pp.) ER - TY - JOUR A1 - Krutty, J D A1 - Schmitt, S K A1 - Gopalan, P A1 - Murphy, W L T1 - Surface functionalization and dynamics of polymeric cell culture substrates. Y1 - 2016/08/ N1 - R835737 JF - CURRENT OPINION IN BIOTECHNOLOGY J1 - CURR OPIN BIOTECH VL - 40 SP - 164 EP - 169 ER - TY - JOUR A1 - Lavine, J A A1 - Farnoodian, M A1 - Wang, S A1 - Darjatmoko, S R A1 - Wright, L S A1 - Gamm, D M A1 - Ip MS, A1 - Sorenson, C M A1 - Sheibani, N T1 - β2-adrenergic receptor antagonism attenuates CNV through inhibition of VEGF and IL-6 expression. Y1 - 2017/01/1 N1 - R835737 VL - 58 IS - 1 SP - 299 EP - 308 ER - TY - JOUR A1 - Lei, J A1 - Murphy, W A1 - Temenoff, J T1 - Combination of Heparin Binding Peptide and Heparin Cell Surface Coatings for Mesenchymal Stem Cell Spheroid Assembly. Y1 - 2018/01/17 N1 - R835737 JF - BIOCONJUGATE CHEMISTRY J1 - BIOCONJUGATE CHEM VL - 29 IS - 4 SP - 878 EP - 884 ER - TY - JOUR A1 - Lemke, K A A1 - Aghayee, A A1 - Ashton, R S T1 - Deriving, regenerating, and engineering CNS tissues using human pluripotent stem cells. Y1 - 2017/10/ N1 - R835737 N1 - R835737C002 VL - 47 SP - 36 EP - 42 ER - TY - JOUR A1 - Lewis, S A1 - Takimoto, T A1 - Mehrvar, S A1 - Higuchi, H A1 - Doebley, A A1 - Stokes, G A1 - Sheibani, N A1 - Ideda, S A1 - Ranji, M A1 - Ikeda, A T1 - The effect of Tmem135 overexpression on the mouse heart. Y1 - 2018/08/13 N1 - R835737 JF - PLOS ONE J1 - PLOS One VL - 13 IS - 8 SP - e0201986 ER - TY - JOUR A1 - Li, C A1 - Hurley, A A1 - Hu, W A1 - Warrick, J A1 - Lozano, G A1 - Ayuso, J A1 - Pan, W A1 - Handlesman, J A1 - Beebe, D T1 - Social motility of biofilm-like microcolonies in a gliding bacterium Y1 - 2021//29 N1 - R835737 JF - NATURE COMMUNICATIONS J1 - Nature Communications VL - 12 SP - 5700 ER - TY - JOUR A1 - Li, H A1 - Liu, W A1 - Sorenson, C M A1 - Sheibani, N A1 - Albert, D M A1 - Senanayake, T A1 - Vinogradov, S A1 - Henkin, J A1 - Zhang, H F T1 - Sustaining intravitreal residence with L-arginine peptide-conjugated nanocarriers. Y1 - 2017/10/1 N1 - R835737 JF - INVESTIGATIVE OPHTHALMOLOLOGY VISUAL SCIENCE< VL - 58 IS - 12 SP - 5142 EP - 5150 ER - TY - JOUR A1 - Lippman, E A1 - Estevez-Silva, M A1 - Ashton, R T1 - Chemically defined differentiation of human pluripotent stem cells to hindbrain and spinal cord neural stem cells with defined regional identities. Y1 - 2015/09/3 N1 - R835737 JF - PROTOCOL EXCHANGE SP - 27 pp ER - TY - JOUR A1 - Livingston, M A1 - Morgan, M A1 - Daly, W A1 - Murphy, W A1 - Johnson, B A1 - Virumbrales-Munoz, M T1 - Evaluation of PEG-Based Hydrogel Influence on Estrogen-Receptor-Driven Responses in MCF7 Breast Cancer Cells Y1 - 2019//09 N1 - R835737 N1 - R835737C003 JF - ACS PUBLICATIONS J1 - ACS Publications VL - 5 IS - 11 SP - 6089 EP - 6098 ER - TY - JOUR A1 - Mahony, C A1 - Ashton, R A1 - Birk, B A1 - Boobis, A A1 - Cull, T A1 - Datson, G A1 - Ewart, L A1 - Knudsen, T A1 - Manou, I A1 - Maurer-Stroh, S T1 - New ideas for non-animal approaches to predict repeated-dose systemic toxicity: Report from an EPAA Blue Sky Workshop Y1 - 2020//01 N1 - R835737 JF - REGULATORY TOXICOLOGY AND PHARMACOLOGY J1 - REGUL TOXICOL PHARM J2 - Regulatory Toxicology and Pharmacology VL - 114 IS - UNSP 104668 ER - TY - JOUR A1 - Majumder, J A1 - Torr, E A1 - Aisenbrey, E A1 - Lebakken, C A1 - Favreau, P A1 - Richards, W A1 - Yin, Y A1 - Chang, Q A1 - Murphy, W T1 - Human induced pluripotent stem cell-derived planar neural organoids assembled on synthetic hydrogels Y1 - 2024/01/01 N1 - R835737 VL - 15 IS - 20417314241230633 SP - 20417314241230633 ER - TY - JOUR A1 - Marti-Figueroa, C R A1 - Ashton, R S T1 - The case for applying tissue engineering methodologies to instruct human organoid morphogenesis. Y1 - 2017/05/ N1 - R835737 N1 - R835737C002 VL - 54 SP - 35 EP - 44 ER - TY - JOUR A1 - Mezu-Ndubuisi, O A1 - Wang, Y A1 - Schoephoerster, J A1 - Falero_Perez, J A1 - Zaitoun, I A1 - Sheibani, A1 - Gong, S T1 - Intravitreal Delivery of VEGF-A(165)-loaded PLGA Microparticles Reduces Retinal Vaso-Obliteration in an In Vivo Mouse Model of Retinopathy of Prematurity. Y1 - 2018/11/09 N1 - R835737 JF - CURRENT EYE RESEARCH J1 - CURR EYE RES VL - 44 IS - Full Text HTML SP - 275 EP - 286 ER - TY - JOUR A1 - Mofidi Najjar, F A1 - Taghavi, F A1 - Ghadari, R A1 - Sheibani, N A1 - Moosavi-Movahedi, A A T1 - Destructive effect of non-enzymatic glycation on catalase and remediation via curcumin. Y1 - 2017/09/15 N1 - R835737 VL - 630 SP - 81 EP - 90 ER - TY - JOUR A1 - Molugy, K A1 - Harkness, T A1 - Carlson-Tevermer, J A1 - Prestil, R A1 - Piscopo, N A1 - Seymour, S A1 - Knight, G A1 - Ashton, R A1 - Saha, K T1 - Tracking and Predicting Human Somatic Cell Reprogramming Using Nuclear Characteristics Y1 - 2020//05 N1 - R835737 JF - BIOPHYSICAL JOURNAL J1 - BIOPHYS J J2 - BIOPHYSICAL JOURNAL VL - 118 IS - 9 SP - 2086 EP - 2102 ER - TY - JOUR A1 - Morgan, M M A1 - Johnson, B P A1 - Livingston, M K A1 - Schuler, L A A1 - Alarid, E T A1 - Sung, K E A1 - Beebe, D J T1 - Personalized in vitro cancer models to predict therapeutic response: challenges and a framework for improvement. Y1 - 2016/09/ N1 - R835737 N1 - R835737C003 JF - PHARMACOLOGY & THERAPEUTICS J1 - PHARMACOL THERAPEUT VL - 165 SP - 79 EP - 92 ER - TY - JOUR A1 - Morgan, M M A1 - Livingston, M K A1 - Warrick, J W A1 - Stanek, E M A1 - Alarid, E T A1 - Beebe, D J A1 - Johnson, B P T1 - Mammary fibroblasts reduce apoptosis and speed estrogen-induced hyperplasia in an organotypic MCF7-derived duct model. Y1 - 2018/05/8 N1 - R835737 N1 - R835737C003 VL - 8 IS - 1 SP - 7139 (13 pp.) ER - TY - JOUR A1 - Morgan, M A1 - Arendt, L A1 - Alarid, E A1 - Beebe, D A1 - Johnson, B T1 - Mammary adipose stromal cells derived from obese women reduce sensitivity to the aromatase inhibitor anastrazole in an organotypic breast model Y1 - 2019//01 N1 - R835737 N1 - R835737C003 JF - FASEB JOURNAL J1 - FASEB J J2 - FASEB Journal VL - 33 IS - 7 SP - 8623 EP - 8633 ER - TY - JOUR A1 - Morgan, M A1 - Schuler, L A1 - Ciciliano, J A1 - Johnson, B A1 - Alarid, E A1 - Beebe, D T1 - Modeling chemical effects on breast cancer: the importance of the microenvironment in vitro Y1 - 2020/02/01 N1 - R835737 JF - INTEGRATIVE BIOLOGY J1 - Integrative Biology VL - 12 IS - 2 SP - 21 EP - 33 ER - TY - JOUR A1 - Nguyen, E H A1 - Daly, W T A1 - Le, N A1 - Farnoodian, M A1 - Belair, D G A1 - Schwartz, M P A1 - Lebakken, C S A1 - Ananiev, G E A1 - Saghiri, M A A1 - Knudsen, T B A1 - Sheibani, N A1 - Murphy, W L T1 - Versatile synthetic alternatives to Matrigel for vascular toxicity screening and stem cell expansion. Y1 - 2017/07/ N1 - R835737 JF - NATURE BIOMEDICAL ENGINEERING VL - 1 IS - 7 SP - 0096 (34 pp.) ER - TY - JOUR A1 - Piscopo, N J A1 - Mueller, K P A1 - Das, A A1 - Hematti, P A1 - Murphy, W L A1 - Palecek, S P A1 - Capitini, C M A1 - Saha, K T1 - Bioengineering solutions for manufacturing challenges in CAR T cells. Y1 - 2018/02/ N1 - R835737 VL - 13 IS - 2 SP - 1700095 (10 pp.) ER - TY - JOUR A1 - Price, T O A1 - Sheibani, N A1 - Shah, G N T1 - Regulation of high glucose-induced apoptosis of brain pericytes by mitochondrial CA VA: a specific target for prevention of diabetic cerebrovascular pathology. Y1 - 2017/04/ N1 - R835737 JF - BIOCHIMICA ET BIOPHYSICA ACTA (BBA) - MOLECULAR BASIS OF DISEASE J1 - NONE VL - 1863 IS - 4 SP - 929 EP - 935 ER - TY - JOUR A1 - Regier, M C A1 - Montanez-Sauri, S I A1 - Schwartz, M P A1 - Murphy, W L A1 - Beebe, D J A1 - Sung, K E T1 - The influence of biomaterials on cytokine production in 3D cultures. Y1 - 2017/03/13 N1 - R835737 JF - BIOMACROMOLECULES VL - 18 IS - 3 SP - 709 EP - 718 ER - TY - JOUR A1 - Ren, J A1 - Liu, Z A1 - Wang, Q A1 - Giles, J A1 - Greenberg, J A1 - Sheibani, N A1 - Kent, K C A1 - Liu, B T1 - Andrographolide ameliorates abdominal aortic aneurysm progression by inhibiting inflammatory cell infiltration through downregulation of cytokine and integrin expression. Y1 - 2016/01/ N1 - R835737 N1 - R835737C004 JF - JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS J1 - J PHARMACOL EXP THER VL - 356 IS - 1 SP - 137 EP - 147 ER - TY - JOUR A1 - Saghiri, M A A1 - Orangi, J A1 - Asatourian, A A1 - Sorenson, C M A1 - Sheibani, N T1 - Functional role of inorganic trace elements in angiogenesis part III: (Ti, Li, Ce, As, Hg, Va, Nb and Pb). Y1 - 2016/02/ N1 - R835737 N1 - R835737C004 JF - CRITICAL REVIEWS IN ONCOLOGY/HEMATOLOGY J1 - CRIT REV ONCOL HEMAT VL - 98 SP - 290 EP - 301 ER - TY - JOUR A1 - Saghiri, M A A1 - Asatourian, A A1 - Garcia-Godoy, F A1 - Sheibani, N T1 - The role of angiogenesis in implant dentistry part I: review of titanium alloys, surface characteristics and treatments. Y1 - 2016/07/01 N1 - R835737 N1 - R835737C004 JF - MEDICINA ORAL, PATOLOGÍA ORAL Y CIRUGÍA BUCAL VL - 21 IS - 4 SP - e514 EP - e525 ER - TY - JOUR A1 - Saghiri, M A A1 - Asatourian, A A1 - Garcia-Godoy, F A1 - Sheibani, N T1 - The role of angiogenesis in implant dentistry part II: the effect of bone-grafting and barrier membrane materials on angiogenesis. Y1 - 2016/07/01 N1 - R835737 N1 - R835737C004 JF - MEDICINA ORAL, PATOLOGÍA ORAL Y CIRUGÍA BUCAL VL - 21 IS - 4 SP - e526 EP - e537 ER - TY - JOUR A1 - Saghiri, M A A1 - Asatourian, A A1 - Garcia-Godoy, F A1 - Sheibani, N T1 - Effect of biomaterials on angiogenesis during vital pulp therapy. Y1 - 2016/10/1 N1 - R835737 N1 - R835737C004 JF - DENTAL MATERIALS JOURNAL VL - 35 IS - 5 SP - 701 EP - 709 ER - TY - JOUR A1 - Saghiri, M A A1 - Orangi, J A1 - Asatourian, A A1 - Gutmann, J L A1 - Garcia-Godoy, F A1 - Lotfi, M A1 - Sheibani, N T1 - Calcium silicate-based cements and functional impacts of various constituents. Y1 - 2017/01/31 N1 - R835737 N1 - R835737C004 JF - DENTAL MATERIALS JOURNAL VL - 36 IS - 1 SP - 8 EP - 18 ER - TY - JOUR A1 - Saghiri, M A A1 - Asatourian, A A1 - Gurel, Z A1 - Sorenson, C M A1 - Sheibani, N T1 - Bcl-2 expression is essential for development and normal physiological properties of tooth hard tissue and saliva production. Y1 - 2017/09/15 N1 - R835737 VL - 358 IS - 2 SP - 94 EP - 100 ER - TY - JOUR A1 - Seirup, M A1 - Chu, L A1 - Sengupta, S A1 - Leng, N A1 - Browder, H A1 - Kapadia, K A1 - Shafer, C A1 - Duffin, B A1 - Elwell, A A1 - Bolin, J T1 - Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis Y1 - 2020/09/28 N1 - R835737 JF - PLOS ONE J1 - PLOS One VL - 15 IS - 9 ER - TY - JOUR A1 - Seirup, M A1 - Sengupta, S A1 - Swanson, S A1 - McIntosh, B A1 - Collins, M A1 - Cu, L A1 - Cheng, Z A1 - Gorkin, D A1 - Duffin, B A1 - Bolin, J A1 - Argus, C A1 - Stewart, R A1 - Thompson, J T1 - Rapid changes in chromatin structure during dedifferentiation of primary hepatocytes in vitro Y1 - 2022//17 N1 - R835737 JF - GENOMICS J1 - GENOMICS VL - 114 IS - 3 SP - 110330 ER - TY - JOUR A1 - Stallcop, L E A1 - Alvarez-García, Y R A1 - Reyes-Ramos, A M A1 - Ramos-Cruz, K P A1 - Morgan, M M A1 - Shi, Y A1 - Li, L A1 - Beebe, D J A1 - Domenech, M A1 - Warrick, J W T1 - Razor-printed sticker microdevices for cell-based applications. Y1 - 2018/01/30 N1 - R835737 N1 - R835737C003 VL - 18 IS - 3 SP - 451 EP - 462 ER - TY - JOUR A1 - Virumbrales-Munoz, M A1 - Ayuso, J A1 - Lacueva, A A1 - Randelovic, T A1 - Livingston, M A1 - Beebe, D A1 - Olivan, S A1 - Pereboom, D A1 - Doblare, M A1 - Fernandez, L T1 - Enabling cell recovery from 3D cell culture microfluidic devices for tumour microenvironment biomarker profiling Y1 - 2020//15 N1 - R835737 JF - SCIENTIFIC REPORTS J1 - Scientific Reports VL - 10 IS - 1 SP - 757 ER - TY - JOUR A1 - Xie, A W A1 - Binder, B Y A1 - Khalil, A S A1 - Schmitt, S K A1 - Johnson, H J A1 - Zacharias, N A A1 - Murphy, W L T1 - Controlled self-assembly of stem cell aggregates instructs pluripotency and lineage bias. Y1 - 2017/10/25 N1 - R835737 JF - SCIENTIFIC REPORTS J1 - Scientific Reports VL - 7 IS - 1 SP - 14070 (15 pp.) ER - TY - JOUR A1 - Xie, A A1 - Zacharias, N A1 - Binder, B A1 - Murphy, W T1 - Controlled aggregation enhances immunomodulatory potential of mesenchymal stromal cell aggregates Y1 - 2021//05 N1 - R835737 JF - STEM CELLS TRANSLATIONAL MEDICINE VL - 1 IS - 18 ER - TY - JOUR A1 - Ye, G A1 - Budzynski, E A1 - Sonnentag, P A1 - Nork, T M A1 - Sheibani, N A1 - Gurel, Z A1 - Boye, S L A1 - Peterson, J J A1 - Boye, S E A1 - Hauswirth, W W A1 - Chulay, J D T1 - Cone-specific promoters for gene therapy of achromatopsia and other retinal diseases. Y1 - 2016/01/ N1 - R835737 N1 - R835737C004 JF - HUMAN GENE THERAPY J1 - HUM GENE THER VL - 27 IS - 1 SP - 72 EP - 82 ER - TY - JOUR A1 - Yu, X A1 - Biedrzycki, A H A1 - Khalil, A S A1 - Hess, D A1 - Umhoefer, J M A1 - Markel, M D A1 - Murphy, W L T1 - Nanostructured mineral coatings stabilize proteins for therapeutic delivery. Y1 - 2017/09/ N1 - R835737 JF - ADVANCED MATERIALS J1 - ADV MATER VL - 29 IS - 33 SP - 1701255 (18 pp.) ER - TY - JOUR A1 - Zanotelli, M R A1 - Ardalani, H A1 - Zhang, J A1 - Hou, Z A1 - Nguyen, E H A1 - Swanson, S A1 - Nguyen, B K A1 - Bolin, J A1 - Elwell, A A1 - Bischel, L L A1 - Xie, A W A1 - Stewart, R A1 - Beebe, D J A1 - Thomson, J A A1 - Schwartz, M P A1 - Murphy, W T1 - Stable engineered vascular networks from human induced pluripotent stem cell-derived endothelial cells cultured in synthetic hydrogels. Y1 - 2016/04/15 N1 - R835737 N1 - R835737C004 N1 - R835737C001 JF - ACTA BIOMATERIALIA VL - 35 SP - 32 EP - 41 ER - TY - JOUR A1 - Zhang, J A1 - Schwartz, M P A1 - Hou, Z A1 - Bai, Y A1 - Ardalani, H A1 - Swanson, S A1 - Steill, J A1 - Ruotti, V A1 - Elwell, A A1 - Nguyen, B K A1 - Bolin, J A1 - Stewart, R A1 - Thomson, J A A1 - Murphy, W L T1 - A genome-wide analysis of vascular morphogenesis for human pluripotent stem cell-derived endothelial cells cultured in synthetic hydrogels compared to standard 2D or 3D culture platforms. Y1 - 2017/04/11 N1 - R835737 N1 - R835737C001 JF - STEM CELL REPORTS VL - 8 IS - 4 SP - 907 EP - 918 ER - TY - JOUR A1 - Zhang, J A1 - Chu, L F A1 - Hou, Z A1 - Schwartz, M P A1 - Hacker, T A1 - Vickerman, V A1 - Swanson, S A1 - Leng, N A1 - Nguyen, B K A1 - Elwell, A A1 - Bolin, J A1 - Brown, M E A1 - Stewart, R A1 - BurlinghamWJ, A1 - Murphy, W L A1 - Thomson, J A T1 - Functional characterization of human pluripotent stem cell-derived arterial endothelial cells. Y1 - 2017/07/ N1 - R835737 N1 - R835737C001 JF - PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES VL - 114 IS - 30 SP - E6072 EP - E6078 ER - TY - JOUR T1 - Chromatin module inference on cellular trajectories identifies key transition points and poised epigenetic states in diverse developmental processes. Y1 - 2017/07/ N1 - R835737C005 N1 - R835737 VL - 27 IS - 7 SP - 1250 EP - 1262 ER - TY - JOUR T1 - Addition of mineral coated microparticles to soluble interleukin-1 receptor antagonist injected subcutaneously improves and extends systemic interleukin-1 inhibition. Y1 - 2018/08/23 N1 - R835737 VL - 1 IS - 7 SP - 1800048. ER - TY - JOUR T1 - Sustained release and protein stabilization reduce the growth factor dosage required for human pluripotent stem cell expansion. Y1 - 2020// N1 - R835737 VL - 248 IS - SP -EP - ER -